Query sequences:
>Simo-Homo-sapiens_GRCh38_11-31664297-31664497
AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGACACAGAAAGAGCTGTTAGATTTGT
CAGAGCGTATaACTTCAGGCATTGACACTTGAGGACATTCTTTTTGTGGATATTTGGTTNNNNNNNNAGTCTGATTTAAAGATACCAAAG
TTTGTGTTTGCTAATAGAATA

Human SNP in dbSNP:
11:31664297-31664497

# of blast hits:
Callorhinchus-milii             :1
Rhincodon-typus-N               :1
Erpetoichthys-calabaricus       :1
Lepisosteus-oculatus            :1
Danio-rerio                     :1
Gasterosteus-aculeatus          :0
Tetraodon-nigroviridis          :0
Oryzias-latipes                 :0
Latimeria-chalumnae             :1
Microcaecilia-unicolor-N        :1
Xenopus-tropicalis              :1
Sphenodon-punctatus             :1
Gekko-japonicus-N               :1
Salvator-merianae               :1
Podarcis-muralis-N              :1
Pogona-vitticeps                :1
Anolis-carolinensis             :1
Python-bivittatus-N             :1
Protobothrops-mucrosquamatus-N  :1
Thamnophis-sirtalis-N           :1
Pseudonaja-textilis-N           :1
Notechis-scutatus               :1
Chelonoidis-abingdonii          :1
Alligator-mississippiensis-N    :1
Dromaius-novaehollandiae        :1
Gallus-gallus                   :1
Ornithorhynchus-anatinus        :1
Monodelphis-domestica           :1
Choloepus-hoffmanni             :0
Chrysochloris-asiatica-N        :1
Condylura-cristata-N            :1
Myotis-lucifugus                :1
Equus-caballus                  :1
Bos-taurus                      :1
Tursiops-truncatus              :1
Heterocephalus-glaber-female    :1
Nannospalax-galili              :1
Mus-musculus                    :1
Propithecus-coquereli           :1
Homo-sapiens                    :1

Alignment of blast hits:
199 sites (1) were used for tree reconstruction by excluding 14 sites (0).
speciesName_database_chr-start-end_geneName_bitScore
                                                                                        1
Used4treeSearch                                                                         111111111111111111111111111111111111111111111111111111111111111111100111111111111111111111
Callorhinchus-milii_3_KI635862.1-c11191492-11191364_ENSCMIG00000018323_155              AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTTGGAATAGC--ACAGAAAGAGCTGCAAGGTTT
Rhincodon-typus-N_v2_NW018061796.1-136784-136905_NONE_145                               AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTTGCAATAGC--ACAGAAAGAGTTGCTCGGTTT
Erpetoichthys-calabaricus_1_2-56059158-56059220_ENSECRG00000004255_92                   --ATAAACTTTCCCATTGTCATTAATGAGGATACATAATACTGAGTGACAAGTGAATTAAGATTG-------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9647340-9647199_elp4_157                             AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGG---GAAAAAAGAGCTGTTAAATTT
Danio-rerio_GRCz11_25-14982965-14983072_pax6a_115                                       AGATAAACTTTCCCATTGTCATTAATGAGGACGGCTAATACTGAGTGACAAGTGCATTTGGAGAGGGA-GAAAAAAGAGCCGTTAAATTT
Latimeria-chalumnae_LatCha1_JH126652.1-1144608-1144742_PAX6_186                         AGATAAACTTTCCCATTGTCATTAATGAGGATAGATAATACTGAGTGACAAGTGCATTAGGAGTGAC--ACAGAAAGAGCTGTTAGATTT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140995046-140994903_NONE_178            AGATAAACTTTCCCATTGTCATTAATGAGGATGAATAATCCTGAGTGACAAGTGCATTAGTAATGAC--ACTGAAAGATCTGTTGGATTT
Xenopus-tropicalis_v91_4-c9928179-9928050_pax6_163                                      AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGTATTAGGCCTGAC--ACAGAGCGAGCTGATAGATTT
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c1322829-1322700_ENSSPUG00000004916_217  AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Gekko-japonicus-N_V1-1_NW015161424.1-489657-489766_NONE_172                             AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ATAGAAAGAGCTGTTGGATTT
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25707936-25707815_ELP4_185                  AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ATAGAAAGAGCTGTTAGATTT
Podarcis-muralis-N_PodMur10_NC041312.1-66208970-66209091_NONE_185                       AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ATAGAAAGAGCTGTTAGATTT
Pogona-vitticeps_1_CEMB01006138.1-c1010232-1010111_NONE_185                             AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ATAGAAAGAGCTGTTAGATTT
Anolis-carolinensis_0_1-60596126-60596247_PAX6_176                                      AGATAAACTTTCCCATTGTCATTAATGAGGATGGGTAATACTGAGTGACAAGTGCATTAGGGATGAC--ATAGAAAGAGCTGTAAGATTT
Python-bivittatus-N_502_NW006532569.1-c336185-336041_NONE_181                           AGATAAACTTTCCCATTGTCCTTAATAAGTATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Protobothrops-mucrosquamatus-N_1-0_NW015387874.1-c243457-243313_NONE_181                AGATAAACTTTCCCATTGTCCTTAATGAGTATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGATAGAGCTGTTAGATTT
Thamnophis-sirtalis-N_6-0_NW013659983.1-c77921-77777_NONE_181                           AGATAAACTTTCCCATTGTCCTTAATGAGTATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4740213-4740069_NONE_181              AGATAAACTTTCCCATTGTCCTTAATGAGTATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACTGAAAGAGCTGTTAGATTT
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15211878-15212022_PAX6_181                 AGATAAACTTTCCCATTGTCCTTAATGAGTATGGGTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACTGAAAGAGCTGTTAGATTT
Chelonoidis-abingdonii_ASM359739v1_PKMU01008833.1-927903-928047_ELP4_222                AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28306752-28306890_NONE_218        AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c544364-544230_ELP4_226                 AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Gallus-gallus_GRCg6a_5-5377906-5378040_ELP4_222                                         AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Ornithorhynchus-anatinus_OANA5_3-17794124-17794258_ENSOANG00000015151_217               AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Monodelphis-domestica_monDom5_5-267266289-267266415_ELP4_155                            AGATAAGCTTTCCCATTGTCATTCATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAGTGACAGAGAGAGAGAGCTGTGAGATTT
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7043846-7044049_NONE_297               AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCGGTTAGATTT
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18581419-18581232_NONE_275                AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Myotis-lucifugus_0_GL429859-3566568-3566767_ELP4_289                                    AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Equus-caballus_0_7-99677548-99677745_PAX6_274                                           AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTACATTT
Bos-taurus_2_15-62436978-62437178_ELP4_306                                              AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Tursiops-truncatus_turTru1_GeneScaffold2669-275942-276151_ELP4_288                      AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Heterocephalus-glaber-female_0_JH602079.1-20444076-20444219_NONE_193                    AGATAAACTTTCCCATTGTCATTAATGAGGGTGGGTAATACTGAGTGACAAGTGCATTAGGAGTGAC--ACGGAGAGAGCTGTTAGATTT
Nannospalax-galili_0_KL199188.1-4838897-4839095_Elp4_298                                AGATAAACTTTCCCATTGTCATTAATGAGGATGGCTAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Mus-musculus_GRCm38_2-c105779564-105779372_Elp4_242                                     AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATGCTGAGTGACAAGTGCATTAGGAATGAC--ACAGAGAGAGCTGTTAGATTT
Propithecus-coquereli_0_KQ022625.1-c5284583-5284383_PAX6_306                            AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
Homo-sapiens_GRCh38_11-31664297-31664497_PAX6_330                                       AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT
YOURSEQ1_Simo-Homo-sapiens_GRCh38_11-31664297-31664497                                  AGATAAACTTTCCCATTGTCATTAATGAGGATGGATAATACTGAGTGACAAGTGCATTAGGAATGAC--ACAGAAAGAGCTGTTAGATTT

                                                                                        91
Used4treeSearch                                                                         111111111111111111111111111111111111111011111111111111111111110000000000011111111111111111
Callorhinchus-milii_3_KI635862.1-c11191492-11191364_ENSCMIG00000018323_155              GTCAAAGCATTTTGCTTCAGGCATTGG-ACTTAAGGCCT-TTC-----------------------------------------------
Rhincodon-typus-N_v2_NW018061796.1-136784-136905_NONE_145                               GTCAAAGCA-TTTGCTTCAGGCATTGG-ACTTAAGG------------------------------------------------------
Erpetoichthys-calabaricus_1_2-56059158-56059220_ENSECRG00000004255_92                   ------------------------------------------------------------------------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9647340-9647199_elp4_157                             GTCAAAGCAGATCATTTCAAGCAGTAAAACTTTAGGC---CTTTTTTGGTGTATTTTT--------------------------------
Danio-rerio_GRCz11_25-14982965-14983072_pax6a_115                                       GTCAAAGCAGATCATTTCA-----------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1144608-1144742_PAX6_186                         GTCAAAGCACATTACTTCAGGCAATAAAACTTCAGGCCG-TTCCTTTT------------------------------------------
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140995046-140994903_NONE_178            GTCAGAGCAAATCAGTTCAGGGAGTGAAATTTAAGGACA-TTCTTTTTTGGTAATTT---------------------------------
Xenopus-tropicalis_v91_4-c9928179-9928050_pax6_163                                      GTCAGAGCCTATCACTCCAAACAGTAGCACTTAAGGACA-TTC-----------------------------------------------
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c1322829-1322700_ENSSPUG00000004916_217  GTCAGAGCATATCACTTCAGGCAATGAAACTTGAGGACA-TTC-----------------------------------------------
Gekko-japonicus-N_V1-1_NW015161424.1-489657-489766_NONE_172                             GTCAGAGCACATCACTTCAGGC--------------------------------------------------------------------
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25707936-25707815_ELP4_185                  GTCAGAGCATATCACTTCAGGCTATGAAACCTGA--------------------------------------------------------
Podarcis-muralis-N_PodMur10_NC041312.1-66208970-66209091_NONE_185                       GTCAGAGCATATCACTTCAGGCTATGAAACCTGA--------------------------------------------------------
Pogona-vitticeps_1_CEMB01006138.1-c1010232-1010111_NONE_185                             GTCAGAGCATATCACTTCAGGCTATGAAACCTGA--------------------------------------------------------
Anolis-carolinensis_0_1-60596126-60596247_PAX6_176                                      GTCAGAGCATATCACTTCAGGCTATGAAACCTGA--------------------------------------------------------
Python-bivittatus-N_502_NW006532569.1-c336185-336041_NONE_181                           GTCAGAGCATATAACTTCAGGCTATGAAACCTGATGGCT-TTTTCTAGGAGTATATTT--------------------------------
Protobothrops-mucrosquamatus-N_1-0_NW015387874.1-c243457-243313_NONE_181                GTCAGAGCATATAACTTCAGGCTATGAAACCTGATGGCT-TTTTCTGGGAGTATATTT--------------------------------
Thamnophis-sirtalis-N_6-0_NW013659983.1-c77921-77777_NONE_181                           GTCAGAGTATATAACTTCAGGCTATGAAACCTGATGGCT-TTTTCTGGGAGTATATTT--------------------------------
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4740213-4740069_NONE_181              GTCAGAGCATATAACTTCAGGCTATGAAACCTGATGGCT-TTTTCTGAGAGTATATTT--------------------------------
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15211878-15212022_PAX6_181                 GTCAGAGCATATAACTTCAGGCTATGAAACCTGATGGCT-TTTTCTGAGAGTATATTT--------------------------------
Chelonoidis-abingdonii_ASM359739v1_PKMU01008833.1-927903-928047_ELP4_222                GTCAGAGCATATCACTTCTGGCAATGAAACTTGAGGACA-TTCTGTTTTTGGTAATTT--------------------------------
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28306752-28306890_NONE_218        GTCAGAGCATATCACTTCAGGCAATGAAACTTGAGGACA-TTTATCTTTTTG--------------------------------------
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c544364-544230_ELP4_226                 GTCAGAGCGTATCACTTCAGGCATTGAAACTTGACGACA-TTCTCTTT------------------------------------------
Gallus-gallus_GRCg6a_5-5377906-5378040_ELP4_222                                         GTCAGAGCATATCACTTCAGGCAATGAAACTTGAGGACA-TTCTCTTT------------------------------------------
Ornithorhynchus-anatinus_OANA5_3-17794124-17794258_ENSOANG00000015151_217               GTCAGAGCACATCACTTCAGGCAAGGAAACTTGAGGACA-TTCTTTTT------------------------------------------
Monodelphis-domestica_monDom5_5-267266289-267266415_ELP4_155                            GTCAGAGCACATCACTTCAGTCACAGGAACTTGAGGA-----------------------------------------------------
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7043846-7044049_NONE_297               GTCAGAGCGTATCACTTCAGGCAGTGACACTTGAGGACA-TTGTTTTTGTGGATATTTGGTG------AGTGAGAAGGGGGTCTGATTTA
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18581419-18581232_NONE_275                GTCAGAGCATATCACTTCAGGGAGTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGATT---------GGGGGGGTAGTCTGATTTA
Myotis-lucifugus_0_GL429859-3566568-3566767_ELP4_289                                    GTCAGAGTCTATCACTTCAGGCAGTGACACTTGAGGACATTCTTTTTTGTGGATATTTGG-----------GATGGGGGGGTCTGATTTA
Equus-caballus_0_7-99677548-99677745_PAX6_274                                           GTCAGAGCGTATCACTTCAGGCAGTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGGTTG----------AGGGGGGCTCTGTTTTA
Bos-taurus_2_15-62436978-62437178_ELP4_306                                              GTCAGAGCATATCACTTCAGGCAGTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGGTT--------GATGGGGGAGGTCTGATTTA
Tursiops-truncatus_turTru1_GeneScaffold2669-275942-276151_ELP4_288                      GTCAGAGCATATCACTTCAGGCAGTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGGTTNNNNNNNNNNNNNNNNAGGTCTGATTTA
Heterocephalus-glaber-female_0_JH602079.1-20444076-20444219_NONE_193                    GTCAGAGCCCATCGCTTCAGGGGCTGACACTTGAGGACG-TTATTTCTGTGGATATT---------------------------------
Nannospalax-galili_0_KL199188.1-4838897-4839095_Elp4_298                                GTCAGAGCGGATCACTTCAGCCATTGACACTTGAGGACA-TTCTTTTTGTAGGTATTTGGTT-----------GAGGGGAGTCTGATTTA
Mus-musculus_GRCm38_2-c105779564-105779372_Elp4_242                                     GTCAGAGCGTATCACTTCAGGCACTGACGCTCGACGACA-TTCCTTTTGAGAGTAT-----------------GGGTGGGGGCTGATTTA
Propithecus-coquereli_0_KQ022625.1-c5284583-5284383_PAX6_306                            GTCAGAGCGTATCACTTCAGGCATTGACACTTGAGGACATTTCTTTTTGTGAATATTTGGTTN----------NNNNNNAATCTGATTTT
Homo-sapiens_GRCh38_11-31664297-31664497_PAX6_330                                       GTCAGAGCGTATCACTTCAGGCATTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGGTT---------NNNNNNNNAGTCTGATTTA
YOURSEQ1_Simo-Homo-sapiens_GRCh38_11-31664297-31664497                                  GTCAGAGCGTATaACTTCAGGCATTGACACTTGAGGACA-TTCTTTTTGTGGATATTTGGTT---------NNNNNNNNAGTCTGATTTA

                                                                                        181
Used4treeSearch                                                                         111111111111111111111111111111111
Callorhinchus-milii_3_KI635862.1-c11191492-11191364_ENSCMIG00000018323_155              ---------------------------------
Rhincodon-typus-N_v2_NW018061796.1-136784-136905_NONE_145                               ---------------------------------
Erpetoichthys-calabaricus_1_2-56059158-56059220_ENSECRG00000004255_92                   ---------------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9647340-9647199_elp4_157                             ---------------------------------
Danio-rerio_GRCz11_25-14982965-14983072_pax6a_115                                       ---------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1144608-1144742_PAX6_186                         ---------------------------------
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140995046-140994903_NONE_178            ---------------------------------
Xenopus-tropicalis_v91_4-c9928179-9928050_pax6_163                                      ---------------------------------
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c1322829-1322700_ENSSPUG00000004916_217  ---------------------------------
Gekko-japonicus-N_V1-1_NW015161424.1-489657-489766_NONE_172                             ---------------------------------
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25707936-25707815_ELP4_185                  ---------------------------------
Podarcis-muralis-N_PodMur10_NC041312.1-66208970-66209091_NONE_185                       ---------------------------------
Pogona-vitticeps_1_CEMB01006138.1-c1010232-1010111_NONE_185                             ---------------------------------
Anolis-carolinensis_0_1-60596126-60596247_PAX6_176                                      ---------------------------------
Python-bivittatus-N_502_NW006532569.1-c336185-336041_NONE_181                           ---------------------------------
Protobothrops-mucrosquamatus-N_1-0_NW015387874.1-c243457-243313_NONE_181                ---------------------------------
Thamnophis-sirtalis-N_6-0_NW013659983.1-c77921-77777_NONE_181                           ---------------------------------
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4740213-4740069_NONE_181              ---------------------------------
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15211878-15212022_PAX6_181                 ---------------------------------
Chelonoidis-abingdonii_ASM359739v1_PKMU01008833.1-927903-928047_ELP4_222                ---------------------------------
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28306752-28306890_NONE_218        ---------------------------------
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c544364-544230_ELP4_226                 ---------------------------------
Gallus-gallus_GRCg6a_5-5377906-5378040_ELP4_222                                         ---------------------------------
Ornithorhynchus-anatinus_OANA5_3-17794124-17794258_ENSOANG00000015151_217               ---------------------------------
Monodelphis-domestica_monDom5_5-267266289-267266415_ELP4_155                            ---------------------------------
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7043846-7044049_NONE_297               AAGATACCAAAGTTTGTGTTTGCTAATAGAGTA
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18581419-18581232_NONE_275                AAGGTACTAAGGTTTGTGTT-------------
Myotis-lucifugus_0_GL429859-3566568-3566767_ELP4_289                                    AAGATACCAAAGTTTGTGTTTGCTTATAGAATA
Equus-caballus_0_7-99677548-99677745_PAX6_274                                           GAG--ACCAAAGTTCACGTTTGCTAATAGAATA
Bos-taurus_2_15-62436978-62437178_ELP4_306                                              AAGATACCAAA-TTTGTGTTTGCTAATAGAATA
Tursiops-truncatus_turTru1_GeneScaffold2669-275942-276151_ELP4_288                      AAGATACCAAGGTTTGTGTTTACTAATAGAATA
Heterocephalus-glaber-female_0_JH602079.1-20444076-20444219_NONE_193                    ---------------------------------
Nannospalax-galili_0_KL199188.1-4838897-4839095_Elp4_298                                AAGACACCAAAGTTTGTGTTTGCTAATAGAATA
Mus-musculus_GRCm38_2-c105779564-105779372_Elp4_242                                     AAGATAGTAAAGTTTATGTTTGCTAATAGAATA
Propithecus-coquereli_0_KQ022625.1-c5284583-5284383_PAX6_306                            AAGATACCAAAGTTTGTGTTTGCTAATAGAATA
Homo-sapiens_GRCh38_11-31664297-31664497_PAX6_330                                       AAGATACCAAAGTTTGTGTTTGCTAATAGAATA
YOURSEQ1_Simo-Homo-sapiens_GRCh38_11-31664297-31664497                                  AAGATACCAAAGTTTGTGTTTGCTAATAGAATA


################ Settings ################

>Taxon_sampling
Callorhinchus-milii_Green
Rhincodon-typus-N_Green
Erpetoichthys-calabaricus_Purple
Lepisosteus-oculatus_Purple
Danio-rerio_Purple
Gasterosteus-aculeatus_Purple
Tetraodon-nigroviridis_Purple
Oryzias-latipes_Purple
Latimeria-chalumnae_Orange
Microcaecilia-unicolor-N_Orange
Xenopus-tropicalis_Orange
Sphenodon-punctatus_Magenta
Gekko-japonicus-N_Magenta
Salvator-merianae_Magenta
Podarcis-muralis-N_Magenta
Pogona-vitticeps_Magenta
Anolis-carolinensis_Magenta
Python-bivittatus-N_Magenta
Protobothrops-mucrosquamatus-N_Magenta
Thamnophis-sirtalis-N_Magenta
Pseudonaja-textilis-N_Magenta
Notechis-scutatus_Magenta
Chelonoidis-abingdonii_Magenta
Alligator-mississippiensis-N_Magenta
Dromaius-novaehollandiae_Magenta
Gallus-gallus_Magenta
Ornithorhynchus-anatinus_Blue
Monodelphis-domestica_Blue
Choloepus-hoffmanni_Blue
Chrysochloris-asiatica-N_Blue
Condylura-cristata-N_Blue
Myotis-lucifugus_Blue
Equus-caballus_Blue
Bos-taurus_Blue
Tursiops-truncatus_Blue
Heterocephalus-glaber-female_Blue
Nannospalax-galili_Blue
Mus-musculus_Blue
Propithecus-coquereli_Blue
Homo-sapiens_Blue

>blastn_task
blastn

>blastn_word_size
11

>blastn_E-value_threshold_for_reported_sequences
1e-3

>Number_of_hits_to_report_per_genome (num_alignments)
2

>Percent_identity_cutoff(perc_identity)
0

>Percent_identity_cutoff(template_length)
18

>Color_template_length:
18

>TreeSearchMethod
Neighbor-joining method (Saitou and Nei 1986)

>SubstitutionModel
TN93 (Tamura and Nei 1993) + gamma

>Dependencies
BLAST 2.7.1+
MAFFT v7.356b
trimAl 1.2rev59
ape in R, Version: 5.0

>Analysis_time
34.4 seconds

>Database
Callorhinchus-milii             :Callorhinchus_milii.Callorhinchus_milii-6.1.3.dna_rm.toplevel.fa
Rhincodon-typus-N               :Rhincodon-typus-N_GCF_001642345.1_ASM164234.v2.dna_nb.genomic.fna
Erpetoichthys-calabaricus       :Erpetoichthys_calabaricus.fErpCal1.1.dna_rm.toplevel.fa
Lepisosteus-oculatus            :Lepisosteus_oculatus.LepOcu1.dna_rm.toplevel.fa
Danio-rerio                     :Danio_rerio.GRCz11.dna_rm.primary_assembly.fa
Gasterosteus-aculeatus          :Gasterosteus_aculeatus.BROADS1.dna_rm.toplevel.fa
Tetraodon-nigroviridis          :Tetraodon_nigroviridis.TETRAODON8.dna_rm.toplevel.fa
Oryzias-latipes                 :Oryzias_latipes.ASM223467v1.dna_rm.toplevel.fa
Latimeria-chalumnae             :Latimeria_chalumnae.LatCha1.dna_rm.toplevel.fa
Microcaecilia-unicolor-N        :Microcaecilia-unicolor-N.GCF_901765095-1.aMicUni1-1.dna_nb.genomic.fna
Xenopus-tropicalis              :Xenopus-tropicalis.v91.dna_rm.toplevel.fa
Sphenodon-punctatus             :Sphenodon_punctatus.ASM311381v1.dna_rm.toplevel.fa
Gekko-japonicus-N               :Gekko-japonicus-N_GCF_001447785.1_Gekko_japonicus.V1-1.dna_nb.genomic.fna
Salvator-merianae               :Salvator_merianae.HLtupMer3.dna_rm.toplevel.fa
Podarcis-muralis-N              :Podarcis-muralis-N.GCF_004329235-1.PodMur10.dna_nb.genomic.fna
Pogona-vitticeps                :Pogona_vitticeps.pvi1.1.dna_rm.toplevel.fa
Anolis-carolinensis             :Anolis_carolinensis.AnoCar2.0.dna_rm.toplevel.fa
Python-bivittatus-N             :Python-molurus-bivittatus-N.GCF_000186305-1_.502.dna_nb.genomic.fna
Protobothrops-mucrosquamatus-N  :Protobothrops-mucrosquamatus-N.GCF_001527695-2.1-0.dna_nb.genomic.fna
Thamnophis-sirtalis-N           :Thamnophis-sirtalis-N.GCF_001077635-1.6-0.dna_nb.genomic.fna
Pseudonaja-textilis-N           :Pseudonaja-textilis-N.GCF_900518735-1.EBS10Xv2-PRI.dna_nb.genomic.fna
Notechis-scutatus               :Notechis_scutatus.TS10Xv2-PRI.dna_rm.toplevel.fa
Chelonoidis-abingdonii          :Chelonoidis_abingdonii.ASM359739v1.dna_rm.toplevel.fa
Alligator-mississippiensis-N    :Alligator-mississippiensis-N.GCF_000281125-3.ASM28112v4.dna_nb.genomic.fna
Dromaius-novaehollandiae        :Dromaius_novaehollandiae.droNov1.dna_rm.toplevel.fa
Gallus-gallus                   :Gallus_gallus.GRCg6a.dna_rm.toplevel.fa
Ornithorhynchus-anatinus        :Ornithorhynchus_anatinus.OANA5.dna_rm.toplevel.fa
Monodelphis-domestica           :Monodelphis_domestica.monDom5.dna_rm.toplevel.fa
Choloepus-hoffmanni             :Choloepus_hoffmanni.choHof1.dna_rm.toplevel.fa
Chrysochloris-asiatica-N        :Chrysochloris-asiatica-N.GCF_000296735-1.ChrAsi1-0.dna_nb.genomic.fna
Condylura-cristata-N            :Condylura-cristata-N.GCF_000260355-1.ConCri1-0.dna_nb.genomic.fna
Myotis-lucifugus                :Myotis_lucifugus.Myoluc2.0.dna_rm.toplevel.fa
Equus-caballus                  :Equus_caballus.EquCab3.0.dna_rm.toplevel.fa
Bos-taurus                      :Bos_taurus.ARS-UCD1.2.dna_rm.toplevel.fa
Tursiops-truncatus              :Tursiops_truncatus.turTru1.dna_rm.toplevel.fa
Heterocephalus-glaber-female    :Heterocephalus_glaber_female.HetGla_female_1.0.dna_rm.toplevel.fa
Nannospalax-galili              :Nannospalax_galili.S.galili_v1.0.dna_rm.toplevel.fa
Mus-musculus                    :Mus_musculus.GRCm38.dna_rm.primary_assembly.fa
Propithecus-coquereli           :Propithecus_coquereli.Pcoq_1.0.dna_rm.toplevel.fa
Homo-sapiens                    :Homo_sapiens.GRCh38.dna_rm.primary_assembly.fa