Query sequences:
>agCNE1
TGTCATTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTGCACCTCCTTTCCCGTACC
TTTGAAACACTGTCTTCTGCTGAAACGATTAGCAGTGCGCTGCGTCAGATCATCCGGCTGTCTGACAGCCATTGTGAGTGAGCTAAATTG
TGAGAAAATGAAAATTTCTGACAATTTCCATTATTGTCAAATGGAGATATTTACTTGTACAAATATTAAAGGTTATTTAAAGATGTAAAC
GGACTTCATTTCATTAGTGGTATGCATCAGGTAATAATTTAAAACAACTACCCAGCCTCATTCAAATAAATTACCAATT

Human SNP in dbSNP:
11:32041336-32041684

# of blast hits:
Callorhinchus-milii             :2
Rhincodon-typus-N               :2
Erpetoichthys-calabaricus       :1
Lepisosteus-oculatus            :1
Danio-rerio                     :0
Gasterosteus-aculeatus          :0
Tetraodon-nigroviridis          :0
Oryzias-latipes                 :0
Latimeria-chalumnae             :1
Microcaecilia-unicolor-N        :1
Xenopus-tropicalis              :0
Sphenodon-punctatus             :1
Gekko-japonicus-N               :1
Salvator-merianae               :1
Podarcis-muralis-N              :1
Pogona-vitticeps                :1
Anolis-carolinensis             :1
Python-bivittatus-N             :1
Protobothrops-mucrosquamatus-N  :1
Thamnophis-sirtalis-N           :1
Pseudonaja-textilis-N           :1
Notechis-scutatus               :1
Chelonoidis-abingdonii          :1
Alligator-mississippiensis-N    :1
Dromaius-novaehollandiae        :1
Gallus-gallus                   :1
Ornithorhynchus-anatinus        :2
Monodelphis-domestica           :1
Choloepus-hoffmanni             :1
Chrysochloris-asiatica-N        :1
Condylura-cristata-N            :1
Myotis-lucifugus                :1
Equus-caballus                  :1
Bos-taurus                      :1
Tursiops-truncatus              :1
Heterocephalus-glaber-female    :0
Nannospalax-galili              :1
Mus-musculus                    :1
Propithecus-coquereli           :1
Homo-sapiens                    :1

Alignment of blast hits:
338 sites (1) were used for tree reconstruction by excluding 50 sites (0).
speciesName_database_chr-start-end_geneName_bitScore
                                                                                        1
Used4treeSearch                                                                         000000111111111111111111111111111111111111111111111111111111111111111111000011111110111111
Callorhinchus-milii_3_KI635862.1-c11063513-11063407_ENSCMIG00000018083_113              TGTCACTGCCACCATTGTCTCCTGTCACATTCATAATTATATGTTCTGATAATAAAGTTTCATTAGTGTCTC----CGCAGCC-CTCTTT
Callorhinchus-milii_3_KI635862.1-c11063251-11063165_ENSCMIG00000018083_49               ------------------------------------------------------------------------------------------
Rhincodon-typus-N_v2_NW018079078.1-c8870-8682_NONE_93                                   TGTCAGGGTCACCCCTGTCTCCTGTCACATTCATAATTATATGTTCTGATA---AAGTTTCATTAGTGTCTC----CGCGTCC-CTCTTT
Rhincodon-typus-N_v2_NW018079077.1-c171714-171526_NONE_93                               TGTCAGGGTCACCCCTGTCTCCTGTCACATTCATAATTATATGTTCTGATA---AAGTTTCATTAGTGTCTC----CGCGTCC-CTCTTT
Erpetoichthys-calabaricus_1_2-56485155-56485333_ENSECRG00000004293_121                  TGTCACTGATGCTATTGTCTCTTGTCATATGCTTAATTATATGTTGTGATAATAAAATTTCGCTCATATCTG----CACATTC-CTCACT
Lepisosteus-oculatus_LepOcu1_LG27-c9543984-9543811_rcn1_92                              TGTCACTGCTGCTATTGTCTCTTGTCAAACTCTTAATTATATGTTCTGATAGTAATATTTCATTCATCTCTA----CACATTG-CTCAAT
Latimeria-chalumnae_LatCha1_JH126652.1-1381848-1382058_rcn1_202                         TGTCATTGCCACCATCGTTTCTTGTCACATTCCTAATTATATGTTCCTATAATAAAATTTCATTAGTGTCTG----TACATCC-CTTGCT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140702400-140702101_NONE_150            ------------CATTGTCTCCTGTCACAATCCTAATTATATGTTCTGATAGGAAAATCTCATTAGCACTGG----CACAGCC-CCTTCC
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c678962-678605_ENSSPUG00000004587_348    TGTCACTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATCT-TTTGCC
Gekko-japonicus-N_V1-1_NW015161424.1-870981-871332_NONE_274                             ------TGCCACCACTGTCTCTTTTCACAATTCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCGG----CACATTC-TCTTCT
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25305860-25305505_ENSSMRG00000001448_240    ------TGCCACTGTTGTCTCTTCCCACAATACTAATTCCATGTTCTGATAATGAAATTTCATTAGTGTCGGTAGACACATTC-TCTTCC
Podarcis-muralis-N_PodMur10_NC041312.1-66438552-66438904_NONE_262                       ------TGACACCATTGTCTCTTCCCACAATTCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATTC-CCTTCC
Pogona-vitticeps_1_CEMB01006138.1-c669537-669186_NONE_280                               ------TGCCACCATTGTCTCTTCCTACAATTGTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCGG----CACATTC-TCTTCC
Anolis-carolinensis_0_1-60928958-60929309_ENSACAG00000002439_259                        ------TGCCACCATTGTCTCTTCCCACAATTGTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCGG----CACATTC-TCTTCC
Python-bivittatus-N_502_NW006532569.1-c64846-64501_NONE_224                             ------TGCCATCCTCATCTCTTCCCACAATTCTAATTC--TGTTCTGATCAG-AAATTTCATTAGTGC-------TTCATTC-CCTTCC
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-35764-36116_NONE_226                   -GTCCTTGCCATCCTCGCCTCTTCTCACAATTCTAATTC--TGTTCTGATCAGAAAATTTCATTAGTGT-------TTCATTCTCTTTTT
Thamnophis-sirtalis-N_6-0_NW013657925.1-495263-495614_NONE_199                          -----TTGCCATCCTTGTTTCTTCCCACAATTCTTATTC--TGTTCTGATCAGAAAATTTCATTGCTGT-------TTCATTC-TCTTCT
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4498305-4497956_NONE_203              -----TTGCCACCCTCGTCTCTTCCCACAATTCTTATTC--TGTTCTGATCAGAAAATTTCATTAGTGT-------TTCATTC-TCTTCT
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15465633-15465982_ENSNSUG00000012105_192   -----TTGCCACCCTCGTCTCTTCCCACAATTCTTATTC--TGTTCTGATCAGAAAATTTCATTAGTGT-------TTCATTC-TCTTCT
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-657405-657760_ENSCABG00000012666_340  --TCACTGCCACCATTGTCTCCTGTCACAACCCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATCC-TTTGCC
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28613573-28613930_NONE_366        TGTCACTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATCC-TTTGCC
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c330258-329901_ENSDNVG00000009769_348   TGTCACTGCCACCATTGTCTCTTGTCACAATTCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATCC-TTTGCC
Gallus-gallus_GRCg6a_5-5549364-5549721_ENSGALG00000012121_348                           TGTCACTGCCACCATTGTCTCTTGTCACAATTCTAATTCTATGTTCTGATAATAAAATTTCATTAGTGTCTG----CACATCC-TTTGCC
Ornithorhynchus-anatinus_OANA5_3-18049134-18049492_ENSOANG00000015148_329               TGTCACTGCTGCCATTGTCTCTTGTTACAAACCTAATTCTATGTTCAGATAATAAAATTTCATTAGTGTCTG----CACATCT-TTTTCC
Ornithorhynchus-anatinus_OANA5_Contig37440-2286-2643_NONE_325                           TGTCACTGCTGCCATTGTCTCTTGTTACAAACCTAATTCTATGTTCAGATAATAAAATTTCATTAGTGTCTG----CACATCT-TTTTCC
Monodelphis-domestica_monDom5_5-267764407-267764766_ENSMODG00000009625_292              TGTCACTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCCGATAATAAAATTTCATTAGTGTCTG----CACATCC-TCTCCC
Choloepus-hoffmanni_choHof1_scaffold4405-c28676-28342_NONE_515                          --------------TTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGCGTCTG----CACCTCC-TTTCCC
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7614223-7614573_NONE_422               TGTCTTCGCTACCATTGTCTCTTGTCACAATTCTAATTCTATGTTCTGATAAT-AAACTTCATTAGTGTCTG----TACCTCA-TTTCCT
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18297429-18297077_NONE_537                TGTCACTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CATCTCC-TTCCCT
Myotis-lucifugus_0_GL429859-3848072-3848418_ENSMLUG00000009140_506                      TGTCATTGCCACCACTGTCTCTTGTCACAATCCTAACCCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CAGTTCC-TTTCCC
Equus-caballus_0_7-100006312-100006657_RCN1_432                                         -GTCATTGGCACCATCGTCTCCTGTCACCGTCCTAATTCCATGTTCTGAGAATCAAACTTCACTAGCGTCTG----CGCCTCC-TCTCCC
Bos-taurus_2_15-62798814-62799163_RCN1_484                                              TGTCATTGGCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CACCTCC-TTTCCC
Tursiops-truncatus_turTru1_GeneScaffold2669-642754-643102_PAX6_490                      TGTCATGGGCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CACCTCC-TTTCCC
Nannospalax-galili_0_KL199188.1-5304329-5304676_Rcn1_404                                TGTCACTGCCACCATTGTCTCTTGTCACAATTCTCAGTCCGTGTTCCAATAATAAAACTTCGTTAGTGTCTG----CACCTCC-TTCCCG
Mus-musculus_GRCm38_2-c105435874-105435528_Rcn1_398                                     TGTCACTGCCACCACTGTCTCTTGTCACAATCCTCATTTCGTGTTCCAGTAAT-AAACTTCATTAGCGTCTG----CACCTCC-TTTGCC
Propithecus-coquereli_0_KQ022625.1-c4932959-4932613_ENSPCOG00000015851_545              TGTCATTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGCGTCTG----CACCTCC-TTTCCC
Homo-sapiens_GRCh38_11-32041336-32041684_RCN1_630                                       TGTCATTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CACCTCC-TTTCCC
YOURSEQ1_agCNE1                                                                         TGTCATTGCCACCATTGTCTCTTGTCACAATCCTAATTCTATGTTCTGATAATAAAACTTCATTAGTGTCTG----CACCTCC-TTTCCC

                                                                                        91
Used4treeSearch                                                                         100001111111111111111111111111001111111111111111000010111001111111111111111111111111110111
Callorhinchus-milii_3_KI635862.1-c11063513-11063407_ENSCMIG00000018083_113              T----TACAATTGAAACACTGTCTTC----------------------------------------------------------------
Callorhinchus-milii_3_KI635862.1-c11063251-11063165_ENSCMIG00000018083_49               ---------------------------------------------ATG------------------------------------------
Rhincodon-typus-N_v2_NW018079078.1-c8870-8682_NONE_93                                   T---ATACAATTGAAATACTGTCTCCTGGTAAGAAAAGATGAGCAACA----T-TTT--ACGTCAGATCATTTGACCATTTGACAG-CCA
Rhincodon-typus-N_v2_NW018079077.1-c171714-171526_NONE_93                               T---ATACAATTGAAATACTGTCTCCTGGTAAGAAAAGATGAGCAACA----T-TTT--ACGTCAGATCATTTGACCATTTGACAG-CCA
Erpetoichthys-calabaricus_1_2-56485155-56485333_ENSECRG00000004293_121                  C----TACTTTTGAAGTACTGTCTTTTTCT--GAAATGATTAACAGTAG-----TTT--ATGTCATATCACTTGACTGTGTGACAG-CCA
Lepisosteus-oculatus_LepOcu1_LG27-c9543984-9543811_rcn1_92                              C----AATTCCTGAAGCACTGTCCTCTGCT--AAAATGATTAGCGGCAT-----TTT--ATGTCATATCATTTGTCTGTTTGACAGAAAA
Latimeria-chalumnae_LatCha1_JH126652.1-1381848-1382058_rcn1_202                         T----TACC-TTGAAGTACTGTCTTCCGCT--AAAGCGATGAGCAGTA----C-TTT--ACGTTATATCATTTGACTGTTTGACAG-CCT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140702400-140702101_NONE_150            T----TACCTCTGAAGTACTGTCTCT-------------------------AT-TTT--ACCTGATATCACTTGACTGTTTGACAG-CCT
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c678962-678605_ENSSPUG00000004587_348    T----TACCTTTGAAGCACTGTCTTGTGCT--GAAACGATTAGCAGTA----C-TTT--ACGTCATATCACTTGACTGTTTGACAG-CCA
Gekko-japonicus-N_V1-1_NW015161424.1-870981-871332_NONE_274                             T----TACCTTTGAAGTACTGTCTCGTGCT--GAAACAATTAGCAGTA----C-TTT--ATGTCCTATCACTTGACTGTTTGACAA-GCA
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25305860-25305505_ENSSMRG00000001448_240    T----TACCTTTGAAGGACTGTCTCATGCT--GAAATAATTAGCAGTA----C-TTT--ACGTCCTATCACTTGACTGTTTGACAA-GCA
Podarcis-muralis-N_PodMur10_NC041312.1-66438552-66438904_NONE_262                       A----TACCTTTGAAGGACTGTCTTGTGCT--GAAACAATTAGCAGTA----CTTTT--ACGTCCTATCACTTGACTGTTTGACAA-GCG
Pogona-vitticeps_1_CEMB01006138.1-c669537-669186_NONE_280                               T----TGCCTTTGAAGTACTGTCTCATGCT--GAAACAATTAGCAGTA----C-TTT--ACGTCCTATCACTTGACTGTTTGACAA-GCA
Anolis-carolinensis_0_1-60928958-60929309_ENSACAG00000002439_259                        T----AGTCTTTGAAGTACTGTCTCGTGCT--GAAACAATTAGCAGTA----C-TTT--ATGTCCTATCACTTGACTGTTTGACAA-GCA
Python-bivittatus-N_502_NW006532569.1-c64846-64501_NONE_224                             T----TTCCTTTGAAGTACTGTCTCGTGCT--GAAACCATTAGCAGTA----C-TTT--ACGTCCTATCACTTGACTGTTTGACAA-GCA
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-35764-36116_NONE_226                   T----TTCCTTTGAAGCACTGTCTTGTGCT--GAAACAATTAGCAGTA----C-TTT--ACATCCTATCACTTGACTGTTTGACAA-GCA
Thamnophis-sirtalis-N_6-0_NW013657925.1-495263-495614_NONE_199                          T----TTCCGTTGAAGCACTGTCTTGTGCT--GAAACAATTAGCAGTA----C-TTTACACATCCTATCACTTGACTGTTTGACAA-GCA
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4498305-4497956_NONE_203              T----TCCCATTGAAGCACTGTCTTGTGCC--GAAACAATTAGCAGTA----C-TTTACACATCCTATCACTTGACTGTTTGACAA-GCA
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15465633-15465982_ENSNSUG00000012105_192   T----TCCTATTGAAGCACTGTCTTGTGCC--GAAACAATTAGCAGTA----C-TTTACACATCCTATCACTTGACTGTTTGACAA-GCA
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-657405-657760_ENSCABG00000012666_340  T----TATCTTTGAAGTACTGTCTTGTGCT--GAAACGATTAGCAGTA----C-TTT--ACGTCATATCACTTGACTATTTGACAG-CCA
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28613573-28613930_NONE_366        T----TACCTTTGAAGTACTGTCTTGTGCT--GAAACGATTAGCAGTA----C-TTT--ACGTCATATCACTTGACTGTTTGACAG-CCA
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c330258-329901_ENSDNVG00000009769_348   T----TACCTTTGAAGTACTGTCTTGTGCT--GAAACGATTAGCAGTA----C-TTT--ACGTCATATCACTTGACTGTTTGACAG-CCA
Gallus-gallus_GRCg6a_5-5549364-5549721_ENSGALG00000012121_348                           T----TACCTTTGAAGTACTGTCTTGTGCT--GAAACGATTAGCAGTA----C-TTT--ACGTCATATCACTTGACTGTTTGACAG-CCA
Ornithorhynchus-anatinus_OANA5_3-18049134-18049492_ENSOANG00000015148_329               T----TACCTTTGAAGCTCTGTCTGCTATC--GAAACAATTAGCAGTA----C-TTT--ACGCCATACTGTTTGACTGTTTGACAG-CCA
Ornithorhynchus-anatinus_OANA5_Contig37440-2286-2643_NONE_325                           C----TACCTTTGAAGCTCTGTC-GCTATC--GAAACAATTAGCAGTA----C-TTT--ACGTCATACTGTTTGACTGTTTGACAG-CCA
Monodelphis-domestica_monDom5_5-267764407-267764766_ENSMODG00000009625_292              T----TACCTTTGAAGGACTGTCTTCTCTG--GAGACGATTAGCGTTA----C-TTT--CCGTCATATCACTTAGCTGCTTGACAG-CCA
Choloepus-hoffmanni_choHof1_scaffold4405-c28676-28342_NONE_515                          T----TACCTTTGAAATACTGTCTTCTGCT--GAAACGATTAGCAGTG----C-TCT--GCGTCATATCATTTGACTGTCTGACAG-CCA
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7614223-7614573_NONE_422               T----TACCTTTGAA-TTTTGTCTTCTGAG--GAAATGGTTAGCAGTGCTCTC-TCT--GCCCTGCATCATCCAGCTGTCTGACAG-TCA
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18297429-18297077_NONE_537                CCCTGTACCTTTGAAATACTGTCTTCTGCT--GAAACGATTAGCAGTG----C-TCT--GCGTCATATCATTTGGCTGTCTGACAG-CTA
Myotis-lucifugus_0_GL429859-3848072-3848418_ENSMLUG00000009140_506                      T----GACCTTGGAAACACTGTCTTCTGCT--GAAACGATTAGCAGT-----C-TCT--GTGTCATATCATTGGGTTGTCTGACAG-CCA
Equus-caballus_0_7-100006312-100006657_RCN1_432                                         C-----ACCTTTGAAATCCCATCTTCT-CT--GAAAGGACTCACAGTG----T-TCT--GCGTCATATTGTTTGGCTGCCTGACAG-CCA
Bos-taurus_2_15-62798814-62799163_RCN1_484                                              T----TACCTTTGAAATACTGTCTTGGGCT--GAAATGACGAGTGATG----C-TCT--GCGTCACATCAGTTGGCTGTCTGACAG-CCT
Tursiops-truncatus_turTru1_GeneScaffold2669-642754-643102_PAX6_490                      T----TACCTTTGAAATACTGTCTTCTGCT--GAAATAACTAGCGATG----C-TCT--GAGTCACATCAGTTGGCTGTCTGACAG-CCT
Nannospalax-galili_0_KL199188.1-5304329-5304676_Rcn1_404                                T----TACCTTTGAAGCACTGTCTTCTGAG--GAAACAATTAGCTGTG----C-TCT--GCGTCCTATCACTTGACTGGCTGACAG-CCA
Mus-musculus_GRCm38_2-c105435874-105435528_Rcn1_398                                     T----TACCTTTGAAACACTGTCTTCTCAT--GAAACAATTAGCTGTG----C-CTT--GCAGCCTATCACCTGGCTGGCTGACAG-CCA
Propithecus-coquereli_0_KQ022625.1-c4932959-4932613_ENSPCOG00000015851_545              T----TACCTTTGAAATACTGTCTTCTGCT--GAAACTATTAGCAATG----C-TCT--GAGTCATATCATTTGGCTGTCTGACAG-CCA
Homo-sapiens_GRCh38_11-32041336-32041684_RCN1_630                                       G----TACCTTTGAAACACTGTCTTCTGCT--GAAACGATTAGCAGTG----C-GCT--GCGTCAGATCATCCGGCTGTCTGACAG-CCA
YOURSEQ1_agCNE1                                                                         G----TACCTTTGAAACACTGTCTTCTGCT--GAAACGATTAGCAGTG----C-GCT--GCGTCAGATCATCCGGCTGTCTGACAG-CCA

                                                                                        181
Used4treeSearch                                                                         111111100111111111111111101111111101111111111111111111111111111100000000000001111011111111
Callorhinchus-milii_3_KI635862.1-c11063513-11063407_ENSCMIG00000018083_113              ------------------------------------------------------------------------------------------
Callorhinchus-milii_3_KI635862.1-c11063251-11063165_ENSCMIG00000018083_49               ---------TAAGCTGACTTATG-------------------------------------------------------------------
Rhincodon-typus-N_v2_NW018079078.1-c8870-8682_NONE_93                                   TTATGCGATCAAGCTAAAATATGAGGAA--------------------------------------------------------------
Rhincodon-typus-N_v2_NW018079077.1-c171714-171526_NONE_93                               TTATGCGATCAAGCTAAAATATGAGGAA--------------------------------------------------------------
Erpetoichthys-calabaricus_1_2-56485155-56485333_ENSECRG00000004293_121                  GTGAGAG--TGAGCTAAATT----------------------------------------------------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9543984-9543811_rcn1_92                              GTGTGAG--TGAGC----------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1381848-1382058_rcn1_202                         TTGTGAG--TGAAGTAAAATGTGAA-AAATTTAA-ATTCCTGACAATTTACATTA-----------------------------------
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140702400-140702101_NONE_150            CTGTGAG--TGAGCTAA------------------AGCTGTGACAA--------ACACTTAAATTGCTGA-AAATTAAGGGATATTTACT
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c678962-678605_ENSSPUG00000004587_348    TTGTGAG--TGAGCTAAACAGTGAG-AAATTAAA-ATTTCTGACAATTTCTATTACATCTAAATTGCCGAGAAATTAAGGGATATTTACT
Gekko-japonicus-N_V1-1_NW015161424.1-870981-871332_NONE_274                             CTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCTAAATTGCTGATAAATTAAAGGATATTTACT
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25305860-25305505_ENSSMRG00000001448_240    TTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCCGACAATTCCCATTACTCTTAAATTGCTGATAAATTAAAGGATATTTACT
Podarcis-muralis-N_PodMur10_NC041312.1-66438552-66438904_NONE_262                       CTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCTAAATTGCTGATAAATTAAAGGATATTTACT
Pogona-vitticeps_1_CEMB01006138.1-c669537-669186_NONE_280                               GTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCAAAATTGCTGATAAATTAAAGGATATTTACT
Anolis-carolinensis_0_1-60928958-60929309_ENSACAG00000002439_259                        GTGTGAG--CGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTTTAAATTGCTGATAAATTAAAGGATATTTACT
Python-bivittatus-N_502_NW006532569.1-c64846-64501_NONE_224                             GTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCTAAATTGCTGATCAATTAAAGGATATTTACT
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-35764-36116_NONE_226                   GTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCTAAATTGCTGATAAATTAAAGCATATTTACT
Thamnophis-sirtalis-N_6-0_NW013657925.1-495263-495614_NONE_199                          GTGTGAG--TGAACTAAATTGTGAG-GAATTAAA-ATTTCTGACAATTCCCATTACTTCTAAATTGCTGATAAATTAAAGCATATTTACT
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4498305-4497956_NONE_203              GTGTGAG--TGAACTAAATTGCGAG-GAATTAAA-ATTTCGGACAATTCCCATTACTTCTAAATTGCTGATAAATTAAAGCATATTTACT
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15465633-15465982_ENSNSUG00000012105_192   GTGTGAG--TGAACTAAATTGCGAG-GAATTAAA-ATTTTGGACTATTCCCATTACTTCTAAATTGCTGATAAATTAAAGCATATTTACT
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-657405-657760_ENSCABG00000012666_340  TTGTGAG--TGAGCTAAATGGTGAG-AAATTAAA-ATTTCTGACAATTTTCATTACATCTAAATTGCTGAGAAATTAAGGGATATTTACT
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28613573-28613930_NONE_366        TTGTGAG--TGAGCTAAATGGTGAG-AAATTAAA-ATTTCTGACAATTTCCATTACATCTAAATTGCTGAGAAATTAAAGGATGTTTACT
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c330258-329901_ENSDNVG00000009769_348   TTGTGAG--TGAGCTAAACGGGGAG-AAATTAAA-ATTTCTGACAATTTCCATTACATCTAAATTGCTGAGAAATTAAGGGATATTTACT
Gallus-gallus_GRCg6a_5-5549364-5549721_ENSGALG00000012121_348                           TTGTGAG--TGAGCTAAACAGAGAG-AAATTAAA-ATTTCTGACAATTTCCATTACATCTAAATTGCTGAGAAATTAAGGGATATTTACT
Ornithorhynchus-anatinus_OANA5_3-18049134-18049492_ENSOANG00000015148_329               TTGTGAG--TGAGCTAAACTGTAAGAAAATTGAA-ATTTCTGACAATTTCCATTACATTTAAATGGCAGAGGAATCAGGGGATATTTACT
Ornithorhynchus-anatinus_OANA5_Contig37440-2286-2643_NONE_325                           TTGTGAG--TGAGCTAAACTGTAAGAAAATTGAA-ATTTCTGACAATTTCCATTACATTTAAATGGCAGAGGAATCAGGGGATATTTACT
Monodelphis-domestica_monDom5_5-267764407-267764766_ENSMODG00000009625_292              TTGTGAG--TGAGCTAAACTGTGAGAAAATTAAA-ATTTCTGACAATTCCCATTATACCCAAATTGTTGGGAAATTAAGGAATATTGACT
Choloepus-hoffmanni_choHof1_scaffold4405-c28676-28342_NONE_515                          TTGTGAG--TGAGCAAAATTGTGAGAAAATGAAA-TTTTCTGACAATTTCCATTACCGTCAAAT-------------GGAGATATTTACT
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7614223-7614573_NONE_422               TTGTGAG--TGCGCTGCACTGCGAGAAAATGAAA-ATGTCTGACAACCTCCATTATTATCAAAT-------------GGAGATATTTGCT
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18297429-18297077_NONE_537                TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAA-ATTTCTGACAATTTCCATTATCGTCAAAT-------------GGAGATATTTACT
Myotis-lucifugus_0_GL429859-3848072-3848418_ENSMLUG00000009140_506                      TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAA-A-TTCTGACAATTTCCATTATCGTCAAAT-------------GGAGATATTTACT
Equus-caballus_0_7-100006312-100006657_RCN1_432                                         TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAC-ATTTCTGACAATTTCCATTATCGTCAAAT-------------GGAGATATTTACT
Bos-taurus_2_15-62798814-62799163_RCN1_484                                              TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAC-ATTTCTGACAATTTCCATTATCGTCAAAT-------------GGAGATATTTACT
Tursiops-truncatus_turTru1_GeneScaffold2669-642754-643102_PAX6_490                      TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAC-GTTTCTGACAATTTCCATTATCGTCAAGT-------------GGAGATATTTACT
Nannospalax-galili_0_KL199188.1-5304329-5304676_Rcn1_404                                TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAATTTTTTTGACAATTTCTATTATCATCAATG-------------GGGGCTGTTTACT
Mus-musculus_GRCm38_2-c105435874-105435528_Rcn1_398                                     TTGTGGG--TGAGCTAAACAGCGAGAAAATGAGA-ATTTTTGACAATTTCCATTATCGTCAATG-------------AGGG-TATTTACT
Propithecus-coquereli_0_KQ022625.1-c4932959-4932613_ENSPCOG00000015851_545              TTGTGAG--TGAGCTAAACTGTGAGAAAATGAAA-ATTTCTGACAATTTGCATTATCGTCAAAT-------------GGAGATATTTACT
Homo-sapiens_GRCh38_11-32041336-32041684_RCN1_630                                       TTGTGAG--TGAGCTAAATTGTGAGAAAATGAAA-ATTTCTGACAATTTCCATTATTGTCAAAT-------------GGAGATATTTACT
YOURSEQ1_agCNE1                                                                         TTGTGAG--TGAGCTAAATTGTGAGAAAATGAAA-ATTTCTGACAATTTCCATTATTGTCAAAT-------------GGAGATATTTACT

                                                                                        271
Used4treeSearch                                                                         111111111111111111111111110111111111110111111100111111111111111111111111111111111111111111
Callorhinchus-milii_3_KI635862.1-c11063513-11063407_ENSCMIG00000018083_113              ------------------------------------------------------------------------------------------
Callorhinchus-milii_3_KI635862.1-c11063251-11063165_ENSCMIG00000018083_49               ------------------------------------------------TTATTAGTGGTTTATACCATATGGTAATTAAAAATGACTGAA
Rhincodon-typus-N_v2_NW018079078.1-c8870-8682_NONE_93                                   ------------------------------------------------------------------------------------------
Rhincodon-typus-N_v2_NW018079077.1-c171714-171526_NONE_93                               ------------------------------------------------------------------------------------------
Erpetoichthys-calabaricus_1_2-56485155-56485333_ENSECRG00000004293_121                  ------------------------------------------------------------------------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9543984-9543811_rcn1_92                              ------------------------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1381848-1382058_rcn1_202                         ------------------------------------------------------------------------------------------
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140702400-140702101_NONE_150            TTTACAAATATGAAAGGTTCTTTACA-ATGTAAACTGA-CTTCATT--TTATTAGTGGATGTCGCAATGTGCTAATTTAAGAGAACTACA
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c678962-678605_ENSSPUG00000004587_348    TTTACAAACATTAAAAGTTGTTTAAA-ATGTAAACTGA-CTTCTTT--TTATTAGTAGATTCCACAATGTGCTAATTCAAAATGACTACA
Gekko-japonicus-N_V1-1_NW015161424.1-870981-871332_NONE_274                             TCTACAAATATTAAAGGTTGTTTAAA-ATTTAATCTGA-CTTTATT--TTATCAGTAGGTTCTACAATGTGCTAATTCAAAATGACTACA
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25305860-25305505_ENSSMRG00000001448_240    TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGGAGGTTCTACAATGTGCTAATTCAAAATGACTACA
Podarcis-muralis-N_PodMur10_NC041312.1-66438552-66438904_NONE_262                       TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGGAGGTTCTACAATGTGCTAATTCAAAATGACTACA
Pogona-vitticeps_1_CEMB01006138.1-c669537-669186_NONE_280                               TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGTAGGTTCTGCAATGTACTAATTCAAAATGACTACA
Anolis-carolinensis_0_1-60928958-60929309_ENSACAG00000002439_259                        TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGGAGGTTCTGCAATGTGCTAATTCAAAATGACTACA
Python-bivittatus-N_502_NW006532569.1-c64846-64501_NONE_224                             TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGGATGTTCTGCCATGTGCTAATTCAAAATGACTACA
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-35764-36116_NONE_226                   TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATT--TTATCAGGATGTTCCGCCATGTGCTAATTCAAAATGACTACA
Thamnophis-sirtalis-N_6-0_NW013657925.1-495263-495614_NONE_199                          TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAACTGA-CTTTATTTATTATCAGGATGTTCTGCCATGTGCTAATTCAAAATGACTACA
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4498305-4497956_NONE_203              TCTACAAATATTAAAGGTTGTTTAAA-ATTTAAAATGA-CTTTATT--TTATCAGGATGTTCTGCCATGTGCTAATTCAAAATGACTACA
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15465633-15465982_ENSNSUG00000012105_192   TCTACAAATATTAAAGGTTGTTTAAA-ATTAAAACTGA-CTTTATT--TTATCAGGATGTTCTGCCATGTGCTAATTCAAAATGACTACA
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-657405-657760_ENSCABG00000012666_340  TTTACAAATATTAAAGGTTGTTTAAA-ATGTAAACTGA-CTTCATT--TTATCAGTAGATTCCACAATGTGCTAATTCAAAATGACTACA
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28613573-28613930_NONE_366        TTTACAAATATTAAAGGTTGTTTAAA-ATGTAAACTGA-CTTCATT--TTATTAGTAGATTTCATGATGTGCTAATTCAAAATGACTACA
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c330258-329901_ENSDNVG00000009769_348   TTCACAAATATTAAAGGTTGTTTAAA-ATGTAAACTGA-CTTCATT--TTATTAGTAGATTCCACAATGTGCTAATTCAAAATGACTACA
Gallus-gallus_GRCg6a_5-5549364-5549721_ENSGALG00000012121_348                           TTTACAAATATTAAAGGTTGTTTAAA-ATGTAAACTGA-CTTCATT--TTATTAGTAGATTTCACAATGTGCTAATTCAAAATGACTACA
Ornithorhynchus-anatinus_OANA5_3-18049134-18049492_ENSOANG00000015148_329               TTTACAAATATTAAAGGTTATGTAAG-ATGTAAACTGA-CTTCAAT--TTATTAGTAGATTTCACAATGTACTAATTTAAAATGACTATC
Ornithorhynchus-anatinus_OANA5_Contig37440-2286-2643_NONE_325                           TTTACAAATATTAAAGGTTATGTAAG-ATGTAAACTGA-CTTCAAT--TTATTAGTAGATTTCACAATGTACTAATTTAAAATGACTATC
Monodelphis-domestica_monDom5_5-267764407-267764766_ENSMODG00000009625_292              TTTGCCAAGCACAAAGGCTATTCAGAAAGGTGAGTGGG-TGCTATT--TTATTAGTTGACTCCATGAGGCGATAATTTGAAACAACTACT
Choloepus-hoffmanni_choHof1_scaffold4405-c28676-28342_NONE_515                          TGTACAAATATTAAAGGTTATTTAAAGATATAAACTGA-CTTCATT--TCATTAATGGCTTGCATAAGGTAATAATTTAAAACAACTACT
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7614223-7614573_NONE_422               TGTACAAATATTAAAGGTTATTGAAAGATGTAAACTGA-CTTTATT--TCATGAGTGGTTTGCATAAGGTAATAATTTAAAACAACTACC
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18297429-18297077_NONE_537                TGTACAAATATTAAAGGTTATTTAAAGATGTAAACTGA-CTTCATT--TCATTAGAGGTTTGCATAAGGTAATAATTTAAAACAACTACC
Myotis-lucifugus_0_GL429859-3848072-3848418_ENSMLUG00000009140_506                      TCTACAAATATTAAAGGTTATTTAAAGATGTAAACCGA-CTTCATT--TCATTAGAGGTTTGCATAAGGTAATAATTTAAAACAAGTACC
Equus-caballus_0_7-100006312-100006657_RCN1_432                                         TGTACAAATATTAAAGGTTATTTAAAGATGTAAACCGA-CTTCATT--TCATTAGAGGTTTGCATAAGGTAATAATTTTAAACAACTACC
Bos-taurus_2_15-62798814-62799163_RCN1_484                                              TGTACAAATATTAAAGGTTATTTCAAGATGTAAACTGACCTTCTTT--TCATTAGAGGTTTGTATAAGGTAATAATTTAAAACAACTATC
Tursiops-truncatus_turTru1_GeneScaffold2669-642754-643102_PAX6_490                      TGTACAAATATTAAAGGTTATTTAAAGATGTAAACTGA-CTTCATT--TCATTAGAGCTTTGTATAAGGTAATAATTTAAAACAACTACC
Nannospalax-galili_0_KL199188.1-5304329-5304676_Rcn1_404                                TGTACAAATATTAAAGGTTATTTAAAGATGTACACTGA-CTTCATT--TCATTAGTGGTTTGTAGAAGGTAATAATTGCAAACAACTACC
Mus-musculus_GRCm38_2-c105435874-105435528_Rcn1_398                                     TGTACAAATATTAAAGGTTATTTAAAGATGTACACTGA-CTTCATT--TCATTAGTGGTTTGTAGAAGGTAATAATTGAAAACAACTACC
Propithecus-coquereli_0_KQ022625.1-c4932959-4932613_ENSPCOG00000015851_545              TGTACAAATATTAAAGGTTATTTAAAGATGTAAACTGA-CTTCATT--TCATTAGTGGTTTGCATAAGGTAATAATTTAAAACAACTACC
Homo-sapiens_GRCh38_11-32041336-32041684_RCN1_630                                       TGTACAAATATTAAAGGTTATTTAAAGATGTAAACGGA-CTTCATT--TCATTAGTGGTATGCATCAGGTAATAATTTAAAACAACTACC
YOURSEQ1_agCNE1                                                                         TGTACAAATATTAAAGGTTATTTAAAGATGTAAACGGA-CTTCATT--TCATTAGTGGTATGCATCAGGTAATAATTTAAAACAACTACC

                                                                                        361
Used4treeSearch                                                                         1011111111111111111111111100
Callorhinchus-milii_3_KI635862.1-c11063513-11063407_ENSCMIG00000018083_113              ----------------------------
Callorhinchus-milii_3_KI635862.1-c11063251-11063165_ENSCMIG00000018083_49               TGGGCCTTATTTAAATAAATTACCAATT
Rhincodon-typus-N_v2_NW018079078.1-c8870-8682_NONE_93                                   ----------------------------
Rhincodon-typus-N_v2_NW018079077.1-c171714-171526_NONE_93                               ----------------------------
Erpetoichthys-calabaricus_1_2-56485155-56485333_ENSECRG00000004293_121                  ----------------------------
Lepisosteus-oculatus_LepOcu1_LG27-c9543984-9543811_rcn1_92                              ----------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1381848-1382058_rcn1_202                         ----------------------------
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140702400-140702101_NONE_150            C-AACCTTGTTTGAATAAATTACC----
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c678962-678605_ENSSPUG00000004587_348    T-GGTCTCATTTGAATAAATTACCAA--
Gekko-japonicus-N_V1-1_NW015161424.1-870981-871332_NONE_274                             C-GGTCTTATTTGAATAAATTACCAA--
Salvator-merianae_HLtupMer3_QVOM01000004.1-c25305860-25305505_ENSSMRG00000001448_240    T-GGCTTTATTTGAATAAATTACCAA--
Podarcis-muralis-N_PodMur10_NC041312.1-66438552-66438904_NONE_262                       A-GCCTTTATTTGAATAAATTACCAA--
Pogona-vitticeps_1_CEMB01006138.1-c669537-669186_NONE_280                               C-GGCCTTATTTGAATAAATTACCAA--
Anolis-carolinensis_0_1-60928958-60929309_ENSACAG00000002439_259                        C-GGCCTTATTTGAATAAATTACCAA--
Python-bivittatus-N_502_NW006532569.1-c64846-64501_NONE_224                             C-TGCCTTATTTGAATAAATTACCAA--
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-35764-36116_NONE_226                   C-CACCTTATTTGAATAAATTACCAA--
Thamnophis-sirtalis-N_6-0_NW013657925.1-495263-495614_NONE_199                          C-CGCCTTATTTGAATAAATTACCAA--
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4498305-4497956_NONE_203              C-CGCCTTATTTGAATAAATTACCAA--
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15465633-15465982_ENSNSUG00000012105_192   C-CGCCTTATTTGAATAAATTACCAA--
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-657405-657760_ENSCABG00000012666_340  C-AGCTTTATTTGAATAAATTACCAA--
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28613573-28613930_NONE_366        C-GGCCAGATTTGAATAAATTACCAA--
Dromaius-novaehollandiae_droNov1_PTEY01000121.1-c330258-329901_ENSDNVG00000009769_348   T-GGCCTTATTTGAATAAATTACCAA--
Gallus-gallus_GRCg6a_5-5549364-5549721_ENSGALG00000012121_348                           T-GGCCTCGTGTGAATAAATTACCAA--
Ornithorhynchus-anatinus_OANA5_3-18049134-18049492_ENSOANG00000015148_329               C-AGGCTCATTCGAATAAATTACCAA--
Ornithorhynchus-anatinus_OANA5_Contig37440-2286-2643_NONE_325                           C-AGGCTCATTCGAATAAATTACCAA--
Monodelphis-domestica_monDom5_5-267764407-267764766_ENSMODG00000009625_292              C-AGTCTCATTTGAATAAGTTACCAA--
Choloepus-hoffmanni_choHof1_scaffold4405-c28676-28342_NONE_515                          C-AGCCTCCTTCAAATAAATTACCAATT
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7614223-7614573_NONE_422               C-AGCCTCATTCAAATGAATTACCAATT
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18297429-18297077_NONE_537                C-AGCTTCATTTGAATAAATTACCAATT
Myotis-lucifugus_0_GL429859-3848072-3848418_ENSMLUG00000009140_506                      C-AGCCTCATTTGAATAAATTACCAATT
Equus-caballus_0_7-100006312-100006657_RCN1_432                                         C-AGACTCATTTGAATAAATTACCAATT
Bos-taurus_2_15-62798814-62799163_RCN1_484                                              C-AGACTCATTTGAATAAATTACCAATT
Tursiops-truncatus_turTru1_GeneScaffold2669-642754-643102_PAX6_490                      C-ATACTCATTTGAATAAATTACCAATT
Nannospalax-galili_0_KL199188.1-5304329-5304676_Rcn1_404                                T-AACCTCATTAGAATAAATTACCAA--
Mus-musculus_GRCm38_2-c105435874-105435528_Rcn1_398                                     T-AACCTCATTAGAATAAATTATCTATT
Propithecus-coquereli_0_KQ022625.1-c4932959-4932613_ENSPCOG00000015851_545              C-AGCCTCATTTGAATAAATTACCAA--
Homo-sapiens_GRCh38_11-32041336-32041684_RCN1_630                                       C-AGCCTCATTCAAATAAATTACCAATT
YOURSEQ1_agCNE1                                                                         C-AGCCTCATTCAAATAAATTACCAATT


################ Settings ################

>Taxon_sampling
Callorhinchus-milii_Green
Rhincodon-typus-N_Green
Erpetoichthys-calabaricus_Purple
Lepisosteus-oculatus_Purple
Danio-rerio_Purple
Gasterosteus-aculeatus_Purple
Tetraodon-nigroviridis_Purple
Oryzias-latipes_Purple
Latimeria-chalumnae_Orange
Microcaecilia-unicolor-N_Orange
Xenopus-tropicalis_Orange
Sphenodon-punctatus_Magenta
Gekko-japonicus-N_Magenta
Salvator-merianae_Magenta
Podarcis-muralis-N_Magenta
Pogona-vitticeps_Magenta
Anolis-carolinensis_Magenta
Python-bivittatus-N_Magenta
Protobothrops-mucrosquamatus-N_Magenta
Thamnophis-sirtalis-N_Magenta
Pseudonaja-textilis-N_Magenta
Notechis-scutatus_Magenta
Chelonoidis-abingdonii_Magenta
Alligator-mississippiensis-N_Magenta
Dromaius-novaehollandiae_Magenta
Gallus-gallus_Magenta
Ornithorhynchus-anatinus_Blue
Monodelphis-domestica_Blue
Choloepus-hoffmanni_Blue
Chrysochloris-asiatica-N_Blue
Condylura-cristata-N_Blue
Myotis-lucifugus_Blue
Equus-caballus_Blue
Bos-taurus_Blue
Tursiops-truncatus_Blue
Heterocephalus-glaber-female_Blue
Nannospalax-galili_Blue
Mus-musculus_Blue
Propithecus-coquereli_Blue
Homo-sapiens_Blue

>blastn_task
blastn

>blastn_word_size
11

>blastn_E-value_threshold_for_reported_sequences
1e-3

>Number_of_hits_to_report_per_genome (num_alignments) 
2

>Percent_identity_cutoff(perc_identity)
0

>Percent_identity_cutoff(template_length)
18

Color template_length:
18

>TreeSearchMethod
Neighbor-joining method (Saitou and Nei 1986)

>SubstitutionModel
TN93 (Tamura and Nei 1993) + gamma

>Dependencies
BLAST 2.7.1+
MAFFT v7.356b
trimAl 1.2rev59
ape in R, Version: 5.0

Analysis time: 43.1 seconds

Database:
Callorhinchus-milii             :Callorhinchus_milii.Callorhinchus_milii-6.1.3.dna_rm.toplevel.fa
Rhincodon-typus-N               :Rhincodon-typus-N_GCF_001642345.1_ASM164234.v2.dna_nb.genomic.fna
Erpetoichthys-calabaricus       :Erpetoichthys_calabaricus.fErpCal1.1.dna_rm.toplevel.fa
Lepisosteus-oculatus            :Lepisosteus_oculatus.LepOcu1.dna_rm.toplevel.fa
Danio-rerio                     :Danio_rerio.GRCz11.dna_rm.primary_assembly.fa
Gasterosteus-aculeatus          :Gasterosteus_aculeatus.BROADS1.dna_rm.toplevel.fa
Tetraodon-nigroviridis          :Tetraodon_nigroviridis.TETRAODON8.dna_rm.toplevel.fa
Oryzias-latipes                 :Oryzias_latipes.ASM223467v1.dna_rm.toplevel.fa
Latimeria-chalumnae             :Latimeria_chalumnae.LatCha1.dna_rm.toplevel.fa
Microcaecilia-unicolor-N        :Microcaecilia-unicolor-N.GCF_901765095-1.aMicUni1-1.dna_nb.genomic.fna
Xenopus-tropicalis              :Xenopus-tropicalis.v91.dna_rm.toplevel.fa
Sphenodon-punctatus             :Sphenodon_punctatus.ASM311381v1.dna_rm.toplevel.fa
Gekko-japonicus-N               :Gekko-japonicus-N_GCF_001447785.1_Gekko_japonicus.V1-1.dna_nb.genomic.fna
Salvator-merianae               :Salvator_merianae.HLtupMer3.dna_rm.toplevel.fa
Podarcis-muralis-N              :Podarcis-muralis-N.GCF_004329235-1.PodMur10.dna_nb.genomic.fna
Pogona-vitticeps                :Pogona_vitticeps.pvi1.1.dna_rm.toplevel.fa
Anolis-carolinensis             :Anolis_carolinensis.AnoCar2.0.dna_rm.toplevel.fa
Python-bivittatus-N             :Python-molurus-bivittatus-N.GCF_000186305-1_.502.dna_nb.genomic.fna
Protobothrops-mucrosquamatus-N  :Protobothrops-mucrosquamatus-N.GCF_001527695-2.1-0.dna_nb.genomic.fna
Thamnophis-sirtalis-N           :Thamnophis-sirtalis-N.GCF_001077635-1.6-0.dna_nb.genomic.fna
Pseudonaja-textilis-N           :Pseudonaja-textilis-N.GCF_900518735-1.EBS10Xv2-PRI.dna_nb.genomic.fna
Notechis-scutatus               :Notechis_scutatus.TS10Xv2-PRI.dna_rm.toplevel.fa
Chelonoidis-abingdonii          :Chelonoidis_abingdonii.ASM359739v1.dna_rm.toplevel.fa
Alligator-mississippiensis-N    :Alligator-mississippiensis-N.GCF_000281125-3.ASM28112v4.dna_nb.genomic.fna
Dromaius-novaehollandiae        :Dromaius_novaehollandiae.droNov1.dna_rm.toplevel.fa
Gallus-gallus                   :Gallus_gallus.GRCg6a.dna_rm.toplevel.fa
Ornithorhynchus-anatinus        :Ornithorhynchus_anatinus.OANA5.dna_rm.toplevel.fa
Monodelphis-domestica           :Monodelphis_domestica.monDom5.dna_rm.toplevel.fa
Choloepus-hoffmanni             :Choloepus_hoffmanni.choHof1.dna_rm.toplevel.fa
Chrysochloris-asiatica-N        :Chrysochloris-asiatica-N.GCF_000296735-1.ChrAsi1-0.dna_nb.genomic.fna
Condylura-cristata-N            :Condylura-cristata-N.GCF_000260355-1.ConCri1-0.dna_nb.genomic.fna
Myotis-lucifugus                :Myotis_lucifugus.Myoluc2.0.dna_rm.toplevel.fa
Equus-caballus                  :Equus_caballus.EquCab3.0.dna_rm.toplevel.fa
Bos-taurus                      :Bos_taurus.ARS-UCD1.2.dna_rm.toplevel.fa
Tursiops-truncatus              :Tursiops_truncatus.turTru1.dna_rm.toplevel.fa
Heterocephalus-glaber-female    :Heterocephalus_glaber_female.HetGla_female_1.0.dna_rm.toplevel.fa
Nannospalax-galili              :Nannospalax_galili.S.galili_v1.0.dna_rm.toplevel.fa
Mus-musculus                    :Mus_musculus.GRCm38.dna_rm.primary_assembly.fa
Propithecus-coquereli           :Propithecus_coquereli.Pcoq_1.0.dna_rm.toplevel.fa
Homo-sapiens                    :Homo_sapiens.GRCh38.dna_rm.primary_assembly.fa